No. words: 1624; after pruning: 1598


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.7 (1,1:650)  623  0.31 0.00 0.15  BE445328Ld06P129E03P129E091F1_078.ab1        1   651 (180)  C BE445328Ld06P129E03P129E091R1_078.ab1   (143)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C BE445328Ld06P129E03P129E091R1_078.ab1   793 
  179    BE445328Ld06P129E03P129E091F1_078.ab1    36 
  183  C BE445328Ld06P129E03P129E091R1_078.ab1   611 
  301    BE445328Ld06P129E03P129E091F1_078.ab1   158 
  305  C BE445328Ld06P129E03P129E091R1_078.ab1   489 
  313    BE445328Ld06P129E03P129E091F1_078.ab1   170 
  317  C BE445328Ld06P129E03P129E091R1_078.ab1   477 
  353    BE445328Ld06P129E03P129E091F1_078.ab1   210 
  393  C BE445328Ld06P129E03P129E091R1_078.ab1   401 
  405    BE445328Ld06P129E03P129E091F1_078.ab1   262 
  413  C BE445328Ld06P129E03P129E091R1_078.ab1   381 
  437    BE445328Ld06P129E03P129E091F1_078.ab1   294 
  489  C BE445328Ld06P129E03P129E091R1_078.ab1   305 
  621    BE445328Ld06P129E03P129E091F1_078.ab1   478 
  641  C BE445328Ld06P129E03P129E091R1_078.ab1   153 
  649    BE445328Ld06P129E03P129E091F1_078.ab1   506 
  653  C BE445328Ld06P129E03P129E091R1_078.ab1   141 
  657    BE445328Ld06P129E03P129E091F1_078.ab1   514 
  721  C BE445328Ld06P129E03P129E091R1_078.ab1    73 
  725    BE445328Ld06P129E03P129E091F1_078.ab1   582 
  729  C BE445328Ld06P129E03P129E091R1_078.ab1    65 
  737    BE445328Ld06P129E03P129E091F1_078.ab1   594 
Contig length: old 973, new 974

Contig length: old 974, new 974
New start: 0