No. words: 1378; after pruning: 1352


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:525)  518  0.19 0.00 0.00  BE445328Ld06P129H03P129H091F1_022.ab1        1   526 (153)  C BE445328Ld06P129H03P129H091R1_022.ab1   (173)   526     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BE445328Ld06P129H03P129H091R1_022.ab1   699 
  253    BE445328Ld06P129H03P129H091F1_022.ab1    80 
  257  C BE445328Ld06P129H03P129H091R1_022.ab1   443 
  293    BE445328Ld06P129H03P129H091F1_022.ab1   120 
  297  C BE445328Ld06P129H03P129H091R1_022.ab1   403 
  437    BE445328Ld06P129H03P129H091F1_022.ab1   264 
  509  C BE445328Ld06P129H03P129H091R1_022.ab1   191 
  585    BE445328Ld06P129H03P129H091F1_022.ab1   412 
  593  C BE445328Ld06P129H03P129H091R1_022.ab1   107 
  597    BE445328Ld06P129H03P129H091F1_022.ab1   424 
  617  C BE445328Ld06P129H03P129H091R1_022.ab1    83 
  621    BE445328Ld06P129H03P129H091F1_022.ab1   448 
Contig length: old 852, new 852

Contig length: old 852, new 852
New start: 0