No. words: 1618; after pruning: 1592


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:650)  621  0.46 0.00 0.15  BE445328Ld07P129E03P129E091F1_076.ab1        1   651 (178)  C BE445328Ld07P129E03P129E091R1_076.ab1   (139)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C BE445328Ld07P129E03P129E091R1_076.ab1   789 
  292    BE445328Ld07P129E03P129E091F1_076.ab1   153 
  300  C BE445328Ld07P129E03P129E091R1_076.ab1   490 
  312    BE445328Ld07P129E03P129E091F1_076.ab1   173 
  316  C BE445328Ld07P129E03P129E091R1_076.ab1   474 
  336    BE445328Ld07P129E03P129E091F1_076.ab1   197 
  340  C BE445328Ld07P129E03P129E091R1_076.ab1   450 
  348    BE445328Ld07P129E03P129E091F1_076.ab1   209 
  352  C BE445328Ld07P129E03P129E091R1_076.ab1   438 
  372    BE445328Ld07P129E03P129E091F1_076.ab1   233 
  392  C BE445328Ld07P129E03P129E091R1_076.ab1   398 
  468    BE445328Ld07P129E03P129E091F1_076.ab1   329 
  472  C BE445328Ld07P129E03P129E091R1_076.ab1   318 
  652    BE445328Ld07P129E03P129E091F1_076.ab1   513 
  688  C BE445328Ld07P129E03P129E091R1_076.ab1   102 
  692    BE445328Ld07P129E03P129E091F1_076.ab1   553 
Contig length: old 967, new 968

Contig length: old 968, new 968
New start: 0