No. words: 1385; after pruning: 1359


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:531)  522  0.38 0.00 0.00  BE445328Ld07P129H03P129H091F1_020.ab1        1   532 (146)  C BE445328Ld07P129H03P129H091R1_020.ab1   (175)   532     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BE445328Ld07P129H03P129H091R1_020.ab1   707 
  295    BE445328Ld07P129H03P129H091F1_020.ab1   120 
  299  C BE445328Ld07P129H03P129H091R1_020.ab1   409 
  367    BE445328Ld07P129H03P129H091F1_020.ab1   192 
  391  C BE445328Ld07P129H03P129H091R1_020.ab1   317 
  439    BE445328Ld07P129H03P129H091F1_020.ab1   264 
  515  C BE445328Ld07P129H03P129H091R1_020.ab1   193 
  527    BE445328Ld07P129H03P129H091F1_020.ab1   352 
  559  C BE445328Ld07P129H03P129H091R1_020.ab1   149 
  587    BE445328Ld07P129H03P129H091F1_020.ab1   412 
  595  C BE445328Ld07P129H03P129H091R1_020.ab1   113 
  599    BE445328Ld07P129H03P129H091F1_020.ab1   424 
Contig length: old 853, new 853

Contig length: old 853, new 853
New start: 0