No. words: 1376; after pruning: 1350


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:525)  518  0.19 0.00 0.00  BE445328Ld09P129H03P129H091F1_047.ab1        1   526 (151)  C BE445328Ld09P129H03P129H091R1_047.ab1   (173)   526     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BE445328Ld09P129H03P129H091R1_047.ab1   699 
  293    BE445328Ld09P129H03P129H091F1_047.ab1   120 
  297  C BE445328Ld09P129H03P129H091R1_047.ab1   403 
  573    BE445328Ld09P129H03P129H091F1_047.ab1   400 
  581  C BE445328Ld09P129H03P129H091R1_047.ab1   119 
  585    BE445328Ld09P129H03P129H091F1_047.ab1   412 
Contig length: old 850, new 850

Contig length: old 850, new 850
New start: 0