No. words: 1387; after pruning: 1361


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:532)  508  0.75 0.19 0.19  BE445328Ld11P129H03P129H091F1_043.ab1        1   533 (147)  C BE445328Ld11P129H03P129H091R1_043.ab1   (174)   533     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C BE445328Ld11P129H03P129H091R1_043.ab1   707 
  294    BE445328Ld11P129H03P129H091F1_043.ab1   119 
  298  C BE445328Ld11P129H03P129H091R1_043.ab1   410 
  302    BE445328Ld11P129H03P129H091F1_043.ab1   127 
  326  C BE445328Ld11P129H03P129H091R1_043.ab1   382 
  490    BE445328Ld11P129H03P129H091F1_043.ab1   315 
  522  C BE445328Ld11P129H03P129H091R1_043.ab1   186 
  542    BE445328Ld11P129H03P129H091F1_043.ab1   367 
  562  C BE445328Ld11P129H03P129H091R1_043.ab1   146 
  574    BE445328Ld11P129H03P129H091F1_043.ab1   399 
  582  C BE445328Ld11P129H03P129H091R1_043.ab1   126 
  586    BE445328Ld11P129H03P129H091F1_043.ab1   411 
Contig length: old 854, new 855

Contig length: old 855, new 855
New start: 0