No. words: 1468; after pruning: 1442


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.7 (1,1:704)  684  0.00 0.00 0.00  BE445328Tu01P129E03P129E091F1_056.ab1        1   705 (9)  C BE445328Tu01P129E03P129E091R1_056.ab1   (49)   705     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  354 nodes

 179 str. conn. components

Path
    1  C BE445328Tu01P129E03P129E091R1_056.ab1   754 
   65    BE445328Tu01P129E03P129E091F1_056.ab1    16 
   73  C BE445328Tu01P129E03P129E091R1_056.ab1   682 
   93    BE445328Tu01P129E03P129E091F1_056.ab1    44 
  109  C BE445328Tu01P129E03P129E091R1_056.ab1   646 
  157    BE445328Tu01P129E03P129E091F1_056.ab1   108 
  169  C BE445328Tu01P129E03P129E091R1_056.ab1   586 
  617    BE445328Tu01P129E03P129E091F1_056.ab1   568 
  629  C BE445328Tu01P129E03P129E091R1_056.ab1   126 
  641    BE445328Tu01P129E03P129E091F1_056.ab1   592 
  713  C BE445328Tu01P129E03P129E091R1_056.ab1    42 
  717    BE445328Tu01P129E03P129E091F1_056.ab1   668 
Contig length: old 763, new 763

Contig length: old 763, new 763
New start: 0