No. words: 1150; after pruning: 1124


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 11.2 (1,1:529)  522  0.00 0.00 0.00  BE445328Tu02P129H03P129H091F1_073.ab1        1   526 (49)  C BE445328Tu02P129H03P129H091R1_073.ab1   (45)   530     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C BE445328Tu02P129H03P129H091R1_073.ab1   575 
  445    BE445328Tu02P129H03P129H091F1_073.ab1   400 
  453  C BE445328Tu02P129H03P129H091R1_073.ab1   123 
  465    BE445328Tu02P129H03P129H091F1_073.ab1   420 
  489  C BE445328Tu02P129H03P129H091R1_073.ab1    87 
  493    BE445328Tu02P129H03P129H091F1_073.ab1   448 
Contig length: old 620, new 620

Contig length: old 620, new 620
New start: 0