No. words: 1071; after pruning: 1031


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.9 (1,1:540)  484  0.96 0.19 0.00  BE445348At02P078A02P078A081F1_084.ab1        1   519 (0)  C BE445348At02P078A02P078A081R1_084.ab1   (10)   542    23 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  244 nodes

 124 str. conn. components

Path
    1  C BE445348At02P078A02P078A081R1_084.ab1   552 
   22    BE445348At02P078A02P078A081F1_084.ab1    11 
   26  C BE445348At02P078A02P078A081R1_084.ab1   527 
   30    BE445348At02P078A02P078A081F1_084.ab1    19 
   54  C BE445348At02P078A02P078A081R1_084.ab1   499 
   58    BE445348At02P078A02P078A081F1_084.ab1    47 
  141  C BE445348At02P078A02P078A081R1_084.ab1   412 
  149    BE445348At02P078A02P078A081F1_084.ab1   138 
  157  C BE445348At02P078A02P078A081R1_084.ab1   396 
  165    BE445348At02P078A02P078A081F1_084.ab1   154 
  185  C BE445348At02P078A02P078A081R1_084.ab1   368 
  197    BE445348At02P078A02P078A081F1_084.ab1   186 
  205  C BE445348At02P078A02P078A081R1_084.ab1   348 
  209    BE445348At02P078A02P078A081F1_084.ab1   198 
  213  C BE445348At02P078A02P078A081R1_084.ab1   340 
  221    BE445348At02P078A02P078A081F1_084.ab1   210 
  249  C BE445348At02P078A02P078A081R1_084.ab1   304 
  253    BE445348At02P078A02P078A081F1_084.ab1   242 
  257  C BE445348At02P078A02P078A081R1_084.ab1   296 
  265    BE445348At02P078A02P078A081F1_084.ab1   254 
  289  C BE445348At02P078A02P078A081R1_084.ab1   264 
  297    BE445348At02P078A02P078A081F1_084.ab1   286 
  313  C BE445348At02P078A02P078A081R1_084.ab1   240 
  325    BE445348At02P078A02P078A081F1_084.ab1   314 
  333  C BE445348At02P078A02P078A081R1_084.ab1   220 
  337    BE445348At02P078A02P078A081F1_084.ab1   326 
  345  C BE445348At02P078A02P078A081R1_084.ab1   208 
  349    BE445348At02P078A02P078A081F1_084.ab1   338 
  405  C BE445348At02P078A02P078A081R1_084.ab1   148 
  409    BE445348At02P078A02P078A081F1_084.ab1   398 
  425  C BE445348At02P078A02P078A081R1_084.ab1   128 
  433    BE445348At02P078A02P078A081F1_084.ab1   422 
  437  C BE445348At02P078A02P078A081R1_084.ab1   116 
  441    BE445348At02P078A02P078A081F1_084.ab1   430 
  461  C BE445348At02P078A02P078A081R1_084.ab1    92 
  477    BE445348At02P078A02P078A081F1_084.ab1   466 
  489  C BE445348At02P078A02P078A081R1_084.ab1    64 
  497    BE445348At02P078A02P078A081F1_084.ab1   486 
  520  C BE445348At02P078A02P078A081R1_084.ab1    33 
Contig length: old 552, new 552

Contig length: old 552, new 552
New start: 0