No. words: 1325; after pruning: 1299


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 11.2 (1,1:526)  510  0.00 0.00 0.00  BE445508Ld02P078C02P078C081F1_059.ab1        1   521 (150)  C BE445508Ld02P078C02P078C081R1_059.ab1   (127)   527     7 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  262 nodes

 133 str. conn. components

Path
    1  C BE445508Ld02P078C02P078C081R1_059.ab1   654 
  175    BE445508Ld02P078C02P078C081F1_059.ab1    48 
  187  C BE445508Ld02P078C02P078C081R1_059.ab1   468 
  191    BE445508Ld02P078C02P078C081F1_059.ab1    64 
  211  C BE445508Ld02P078C02P078C081R1_059.ab1   444 
  215    BE445508Ld02P078C02P078C081F1_059.ab1    88 
  275  C BE445508Ld02P078C02P078C081R1_059.ab1   380 
  283    BE445508Ld02P078C02P078C081F1_059.ab1   156 
  327  C BE445508Ld02P078C02P078C081R1_059.ab1   328 
  511    BE445508Ld02P078C02P078C081F1_059.ab1   384 
  551  C BE445508Ld02P078C02P078C081R1_059.ab1   104 
  559    BE445508Ld02P078C02P078C081F1_059.ab1   432 
  587  C BE445508Ld02P078C02P078C081R1_059.ab1    68 
  591    BE445508Ld02P078C02P078C081F1_059.ab1   464 
  595  C BE445508Ld02P078C02P078C081R1_059.ab1    60 
  599    BE445508Ld02P078C02P078C081F1_059.ab1   472 
  615  C BE445508Ld02P078C02P078C081R1_059.ab1    40 
  623    BE445508Ld02P078C02P078C081F1_059.ab1   496 
  635  C BE445508Ld02P078C02P078C081R1_059.ab1    20 
  639    BE445508Ld02P078C02P078C081F1_059.ab1   512 
Contig length: old 798, new 798

Contig length: old 798, new 798
New start: 0