No. words: 1308; after pruning: 1282


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.4 (1,1:509)  496  0.00 0.20 0.00  BE445508Ld03P078C02P078C081F1_057.ab1        1   510 (153)  C BE445508Ld03P078C02P078C081R1_057.ab1   (134)   511     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  252 nodes

 128 str. conn. components

Path
    1  C BE445508Ld03P078C02P078C081R1_057.ab1   645 
  175    BE445508Ld03P078C02P078C081F1_057.ab1    40 
  211  C BE445508Ld03P078C02P078C081R1_057.ab1   435 
  215    BE445508Ld03P078C02P078C081F1_057.ab1    80 
  247  C BE445508Ld03P078C02P078C081R1_057.ab1   399 
  267    BE445508Ld03P078C02P078C081F1_057.ab1   132 
  275  C BE445508Ld03P078C02P078C081R1_057.ab1   371 
  283    BE445508Ld03P078C02P078C081F1_057.ab1   148 
  327  C BE445508Ld03P078C02P078C081R1_057.ab1   319 
  427    BE445508Ld03P078C02P078C081F1_057.ab1   292 
  439  C BE445508Ld03P078C02P078C081R1_057.ab1   207 
  451    BE445508Ld03P078C02P078C081F1_057.ab1   316 
  471  C BE445508Ld03P078C02P078C081R1_057.ab1   175 
  491    BE445508Ld03P078C02P078C081F1_057.ab1   356 
  551  C BE445508Ld03P078C02P078C081R1_057.ab1    95 
  559    BE445508Ld03P078C02P078C081F1_057.ab1   424 
  587  C BE445508Ld03P078C02P078C081R1_057.ab1    59 
  595    BE445508Ld03P078C02P078C081F1_057.ab1   460 
  615  C BE445508Ld03P078C02P078C081R1_057.ab1    31 
  623    BE445508Ld03P078C02P078C081F1_057.ab1   488 
  627  C BE445508Ld03P078C02P078C081R1_057.ab1    19 
  631    BE445508Ld03P078C02P078C081F1_057.ab1   496 
Contig length: old 798, new 798

Contig length: old 798, new 798
New start: 0