No. words: 702; after pruning: 676


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 2.6 (1,1:300)  286  0.33 0.00 0.33  BE445508Sn31P095H04P078C081F1_027.ab1        1   301 (53)  C BE445508Sn31P095H04P078C081R1_027.ab1   (48)   300     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  142 nodes

 73 str. conn. components

Path
    1  C BE445508Sn31P095H04P078C081R1_027.ab1   348 
  196    BE445508Sn31P095H04P078C081F1_027.ab1   148 
  200  C BE445508Sn31P095H04P078C081R1_027.ab1   149 
  228    BE445508Sn31P095H04P078C081F1_027.ab1   180 
Contig length: old 401, new 402

Contig length: old 402, new 402
New start: 0