No. words: 472; after pruning: 446


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -2.0 -2.0 (1,1:194)  175  0.00 0.51 1.02  BE445508Ta13P095E04P078C081F1_035.ab1        1   196 (35)  C BE445508Ta13P095E04P078C081R1_035.ab1   (46)   195     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-2.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  88 nodes

 46 str. conn. components

Path
    1  C BE445508Ta13P095E04P078C081R1_035.ab1   241 
  140    BE445508Ta13P095E04P078C081F1_035.ab1    93 
  152  C BE445508Ta13P095E04P078C081R1_035.ab1    90 
  156    BE445508Ta13P095E04P078C081F1_035.ab1   109 
  168  C BE445508Ta13P095E04P078C081R1_035.ab1    74 
  176    BE445508Ta13P095E04P078C081F1_035.ab1   129 
Contig length: old 277, new 278

Contig length: old 278, new 278
New start: 0