No. words: 480; after pruning: 454


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -1.7 -1.7 (1,1:201)  176  0.49 0.49 1.47  BE445508Ta23P095E04P078C081F1_057.ab1        1   204 (34)  C BE445508Ta23P095E04P078C081R1_057.ab1   (40)   202     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-1.7       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1  C BE445508Ta23P095E04P078C081R1_057.ab1   242 
  113    BE445508Ta23P095E04P078C081F1_057.ab1    72 
  121  C BE445508Ta23P095E04P078C081R1_057.ab1   122 
  141    BE445508Ta23P095E04P078C081F1_057.ab1   100 
  153  C BE445508Ta23P095E04P078C081R1_057.ab1    90 
  177    BE445508Ta23P095E04P078C081F1_057.ab1   136 
Contig length: old 278, new 279

Contig length: old 279, new 279
New start: 0