No. words: 1559; after pruning: 1533


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.5 (1,1:743)  726  0.00 0.00 0.00  BE446087Sn25P038A09P016F091F1_079.ab1        1   744 (35)  C BE446087Sn25P038A09P016F091R1_079.ab1   (36)   744     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1  C BE446087Sn25P038A09P016F091R1_079.ab1   780 
   80    BE446087Sn25P038A09P016F091F1_079.ab1    44 
   88  C BE446087Sn25P038A09P016F091R1_079.ab1   693 
  220    BE446087Sn25P038A09P016F091F1_079.ab1   184 
  224  C BE446087Sn25P038A09P016F091R1_079.ab1   557 
  752    BE446087Sn25P038A09P016F091F1_079.ab1   716 
  756  C BE446087Sn25P038A09P016F091R1_079.ab1    25 
  768    BE446087Sn25P038A09P016F091F1_079.ab1   732 
Contig length: old 815, new 815

Contig length: old 815, new 815
New start: 0