No. words: 1503; after pruning: 1477


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   10    0.0 13.1 (1,1:813)  643  0.30 0.00 0.00  BE446087Sn25P052H03P016F091F1_064.ab1       11   676 (0)  C BE446087Sn25P052H03P016F091R1_064.ab1   (23)   804   139 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
10       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C BE446087Sn25P052H03P016F091R1_064.ab1   827 
   27    BE446087Sn25P052H03P016F091F1_064.ab1    14 
  416  C BE446087Sn25P052H03P016F091R1_064.ab1   412 
  420    BE446087Sn25P052H03P016F091F1_064.ab1   407 
  424  C BE446087Sn25P052H03P016F091R1_064.ab1   404 
  428    BE446087Sn25P052H03P016F091F1_064.ab1   415 
  452  C BE446087Sn25P052H03P016F091R1_064.ab1   376 
  460    BE446087Sn25P052H03P016F091F1_064.ab1   447 
  464  C BE446087Sn25P052H03P016F091R1_064.ab1   364 
  472    BE446087Sn25P052H03P016F091F1_064.ab1   459 
  492  C BE446087Sn25P052H03P016F091R1_064.ab1   336 
  500    BE446087Sn25P052H03P016F091F1_064.ab1   487 
  520  C BE446087Sn25P052H03P016F091R1_064.ab1   308 
  532    BE446087Sn25P052H03P016F091F1_064.ab1   519 
  544  C BE446087Sn25P052H03P016F091R1_064.ab1   284 
  548    BE446087Sn25P052H03P016F091F1_064.ab1   535 
  564  C BE446087Sn25P052H03P016F091R1_064.ab1   264 
Contig length: old 827, new 827

Contig length: old 827, new 827
New start: 0