No. words: 1548; after pruning: 1522


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.1 (1,1:734)  713  0.00 0.14 0.00  BE446087Sn26P038A09P016F091F1_077.ab1        1   735 (29)  C BE446087Sn26P038A09P016F091R1_077.ab1   (48)   736     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  366 nodes

 185 str. conn. components

Path
    1  C BE446087Sn26P038A09P016F091R1_077.ab1   784 
   76    BE446087Sn26P038A09P016F091F1_077.ab1    27 
   80  C BE446087Sn26P038A09P016F091R1_077.ab1   705 
   84    BE446087Sn26P038A09P016F091F1_077.ab1    35 
   92  C BE446087Sn26P038A09P016F091R1_077.ab1   693 
  224    BE446087Sn26P038A09P016F091F1_077.ab1   175 
  228  C BE446087Sn26P038A09P016F091R1_077.ab1   557 
  432    BE446087Sn26P038A09P016F091F1_077.ab1   383 
  436  C BE446087Sn26P038A09P016F091R1_077.ab1   349 
  628    BE446087Sn26P038A09P016F091F1_077.ab1   579 
  632  C BE446087Sn26P038A09P016F091R1_077.ab1   153 
  676    BE446087Sn26P038A09P016F091F1_077.ab1   627 
  680  C BE446087Sn26P038A09P016F091R1_077.ab1   105 
  772    BE446087Sn26P038A09P016F091F1_077.ab1   723 
Contig length: old 813, new 813

Contig length: old 813, new 813
New start: 0