No. words: 1367; after pruning: 1341


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:634)  614  0.00 0.32 0.00  BE446087Sn27P052G03P016F091F1_060.ab1        1   634 (49)  C BE446087Sn27P052G03P016F091R1_060.ab1   (48)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BE446087Sn27P052G03P016F091R1_060.ab1   684 
   75    BE446087Sn27P052G03P016F091F1_060.ab1    25 
   83  C BE446087Sn27P052G03P016F091R1_060.ab1   602 
   95    BE446087Sn27P052G03P016F091F1_060.ab1    45 
   99  C BE446087Sn27P052G03P016F091R1_060.ab1   586 
  103    BE446087Sn27P052G03P016F091F1_060.ab1    53 
  119  C BE446087Sn27P052G03P016F091R1_060.ab1   566 
  123    BE446087Sn27P052G03P016F091F1_060.ab1    73 
  131  C BE446087Sn27P052G03P016F091R1_060.ab1   554 
  143    BE446087Sn27P052G03P016F091F1_060.ab1    93 
  171  C BE446087Sn27P052G03P016F091R1_060.ab1   514 
  175    BE446087Sn27P052G03P016F091F1_060.ab1   125 
  179  C BE446087Sn27P052G03P016F091R1_060.ab1   506 
  195    BE446087Sn27P052G03P016F091F1_060.ab1   145 
  431  C BE446087Sn27P052G03P016F091R1_060.ab1   254 
  439    BE446087Sn27P052G03P016F091F1_060.ab1   389 
  451  C BE446087Sn27P052G03P016F091R1_060.ab1   234 
  503    BE446087Sn27P052G03P016F091F1_060.ab1   453 
  507  C BE446087Sn27P052G03P016F091R1_060.ab1   178 
  591    BE446087Sn27P052G03P016F091F1_060.ab1   541 
  595  C BE446087Sn27P052G03P016F091R1_060.ab1    90 
  635    BE446087Sn27P052G03P016F091F1_060.ab1   585 
  647  C BE446087Sn27P052G03P016F091R1_060.ab1    38 
  679    BE446087Sn27P052G03P016F091F1_060.ab1   629 
Contig length: old 732, new 733

Contig length: old 733, new 733
New start: 0