No. words: 1334; after pruning: 1308


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.1 (1,1:589)  576  0.00 0.00 0.00  BE446087Sn28P052G03P016F091F1_058.ab1        1   590 (104)  C BE446087Sn28P052G03P016F091R1_058.ab1   (50)   590     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE446087Sn28P052G03P016F091R1_058.ab1   640 
   62    BE446087Sn28P052G03P016F091F1_058.ab1    12 
   78  C BE446087Sn28P052G03P016F091R1_058.ab1   563 
   90    BE446087Sn28P052G03P016F091F1_058.ab1    40 
   94  C BE446087Sn28P052G03P016F091R1_058.ab1   547 
   98    BE446087Sn28P052G03P016F091F1_058.ab1    48 
  134  C BE446087Sn28P052G03P016F091R1_058.ab1   507 
  138    BE446087Sn28P052G03P016F091F1_058.ab1    88 
  150  C BE446087Sn28P052G03P016F091R1_058.ab1   491 
  162    BE446087Sn28P052G03P016F091F1_058.ab1   112 
  182  C BE446087Sn28P052G03P016F091R1_058.ab1   459 
  186    BE446087Sn28P052G03P016F091F1_058.ab1   136 
  190  C BE446087Sn28P052G03P016F091R1_058.ab1   451 
  198    BE446087Sn28P052G03P016F091F1_058.ab1   148 
  430  C BE446087Sn28P052G03P016F091R1_058.ab1   211 
  454    BE446087Sn28P052G03P016F091F1_058.ab1   404 
  458  C BE446087Sn28P052G03P016F091R1_058.ab1   183 
  470    BE446087Sn28P052G03P016F091F1_058.ab1   420 
  474  C BE446087Sn28P052G03P016F091R1_058.ab1   167 
  490    BE446087Sn28P052G03P016F091F1_058.ab1   440 
  494  C BE446087Sn28P052G03P016F091R1_058.ab1   147 
  614    BE446087Sn28P052G03P016F091F1_058.ab1   564 
  622  C BE446087Sn28P052G03P016F091R1_058.ab1    19 
  634    BE446087Sn28P052G03P016F091F1_058.ab1   584 
Contig length: old 744, new 744

Contig length: old 744, new 744
New start: 0