No. words: 1253; after pruning: 1227


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:757)  471  0.61 0.00 0.00  BE446087Sn30P052H03P016F091F1_054.ab1       81   575 (0)  C BE446087Sn30P052H03P016F091R1_054.ab1   (0)   678   184 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1    BE446087Sn30P052H03P016F091F1_054.ab1     1 
  449  C BE446087Sn30P052H03P016F091R1_054.ab1   310 
  453    BE446087Sn30P052H03P016F091F1_054.ab1   453 
  457  C BE446087Sn30P052H03P016F091R1_054.ab1   302 
  461    BE446087Sn30P052H03P016F091F1_054.ab1   461 
  481  C BE446087Sn30P052H03P016F091R1_054.ab1   278 
  489    BE446087Sn30P052H03P016F091F1_054.ab1   489 
  521  C BE446087Sn30P052H03P016F091R1_054.ab1   238 
  525    BE446087Sn30P052H03P016F091F1_054.ab1   525 
  529  C BE446087Sn30P052H03P016F091R1_054.ab1   230 
Contig length: old 758, new 758

Contig length: old 758, new 758
New start: 0