No. words: 1366; after pruning: 1340


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:632)  621  0.00 0.00 0.00  BE446087Sn31P052G03P016F091F1_052.ab1        1   633 (50)  C BE446087Sn31P052G03P016F091R1_052.ab1   (50)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE446087Sn31P052G03P016F091R1_052.ab1   683 
   54    BE446087Sn31P052G03P016F091F1_052.ab1     4 
   62  C BE446087Sn31P052G03P016F091R1_052.ab1   622 
   82    BE446087Sn31P052G03P016F091F1_052.ab1    32 
  134  C BE446087Sn31P052G03P016F091R1_052.ab1   550 
  138    BE446087Sn31P052G03P016F091F1_052.ab1    88 
  158  C BE446087Sn31P052G03P016F091R1_052.ab1   526 
  162    BE446087Sn31P052G03P016F091F1_052.ab1   112 
  170  C BE446087Sn31P052G03P016F091R1_052.ab1   514 
  174    BE446087Sn31P052G03P016F091F1_052.ab1   124 
  186  C BE446087Sn31P052G03P016F091R1_052.ab1   498 
  198    BE446087Sn31P052G03P016F091F1_052.ab1   148 
  322  C BE446087Sn31P052G03P016F091R1_052.ab1   362 
  326    BE446087Sn31P052G03P016F091F1_052.ab1   276 
  426  C BE446087Sn31P052G03P016F091R1_052.ab1   258 
  430    BE446087Sn31P052G03P016F091F1_052.ab1   380 
  446  C BE446087Sn31P052G03P016F091R1_052.ab1   238 
  454    BE446087Sn31P052G03P016F091F1_052.ab1   404 
  478  C BE446087Sn31P052G03P016F091R1_052.ab1   206 
  494    BE446087Sn31P052G03P016F091F1_052.ab1   444 
  498  C BE446087Sn31P052G03P016F091R1_052.ab1   186 
  506    BE446087Sn31P052G03P016F091F1_052.ab1   456 
  510  C BE446087Sn31P052G03P016F091R1_052.ab1   174 
  514    BE446087Sn31P052G03P016F091F1_052.ab1   464 
  538  C BE446087Sn31P052G03P016F091R1_052.ab1   146 
  542    BE446087Sn31P052G03P016F091F1_052.ab1   492 
  558  C BE446087Sn31P052G03P016F091R1_052.ab1   126 
  562    BE446087Sn31P052G03P016F091F1_052.ab1   512 
  566  C BE446087Sn31P052G03P016F091R1_052.ab1   118 
  574    BE446087Sn31P052G03P016F091F1_052.ab1   524 
  586  C BE446087Sn31P052G03P016F091R1_052.ab1    98 
  598    BE446087Sn31P052G03P016F091F1_052.ab1   548 
  602  C BE446087Sn31P052G03P016F091R1_052.ab1    82 
  606    BE446087Sn31P052G03P016F091F1_052.ab1   556 
  610  C BE446087Sn31P052G03P016F091R1_052.ab1    74 
  618    BE446087Sn31P052G03P016F091F1_052.ab1   568 
  626  C BE446087Sn31P052G03P016F091R1_052.ab1    58 
  638    BE446087Sn31P052G03P016F091F1_052.ab1   588 
  650  C BE446087Sn31P052G03P016F091R1_052.ab1    34 
  674    BE446087Sn31P052G03P016F091F1_052.ab1   624 
Contig length: old 733, new 733

Contig length: old 733, new 733
New start: 0