No. words: 1579; after pruning: 1553


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.8 (1,1:753)  725  0.00 0.27 0.00  BE446087Sn32P038A09P016F091F1_065.ab1        2   753 (38)  C BE446087Sn32P038A09P016F091R1_065.ab1   (34)   754     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  372 nodes

 188 str. conn. components

Path
    1  C BE446087Sn32P038A09P016F091R1_065.ab1   788 
   79    BE446087Sn32P038A09P016F091F1_065.ab1    44 
   83  C BE446087Sn32P038A09P016F091R1_065.ab1   706 
   87    BE446087Sn32P038A09P016F091F1_065.ab1    52 
   99  C BE446087Sn32P038A09P016F091R1_065.ab1   690 
  111    BE446087Sn32P038A09P016F091F1_065.ab1    76 
  115  C BE446087Sn32P038A09P016F091R1_065.ab1   674 
  155    BE446087Sn32P038A09P016F091F1_065.ab1   120 
  159  C BE446087Sn32P038A09P016F091R1_065.ab1   630 
  223    BE446087Sn32P038A09P016F091F1_065.ab1   188 
  227  C BE446087Sn32P038A09P016F091R1_065.ab1   562 
  775    BE446087Sn32P038A09P016F091F1_065.ab1   740 
Contig length: old 825, new 826

Contig length: old 826, new 826
New start: 0