No. words: 1154; after pruning: 1128


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 9.7 (1,1:697)  442  0.00 0.00 0.00  BE446087Sn32P052H03P016F091F1_050.ab1      119   573 (1)  C BE446087Sn32P052H03P016F091R1_050.ab1   (0)   580   126 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1    BE446087Sn32P052H03P016F091F1_050.ab1     1 
  406  C BE446087Sn32P052H03P016F091R1_050.ab1   293 
  418    BE446087Sn32P052H03P016F091F1_050.ab1   418 
  446  C BE446087Sn32P052H03P016F091R1_050.ab1   253 
  458    BE446087Sn32P052H03P016F091F1_050.ab1   458 
  474  C BE446087Sn32P052H03P016F091R1_050.ab1   225 
  478    BE446087Sn32P052H03P016F091F1_050.ab1   478 
  482  C BE446087Sn32P052H03P016F091R1_050.ab1   217 
  490    BE446087Sn32P052H03P016F091F1_050.ab1   490 
  502  C BE446087Sn32P052H03P016F091R1_050.ab1   197 
Contig length: old 698, new 698

Contig length: old 698, new 698
New start: 0