No. words: 1537; after pruning: 1511


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:751)  724  0.00 0.27 0.00  BE446087Ta11P038A09P016F091F1_059.ab1        1   751 (6)  C BE446087Ta11P038A09P016F091R1_059.ab1   (27)   753     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  370 nodes

 187 str. conn. components

Path
    1  C BE446087Ta11P038A09P016F091R1_059.ab1   780 
   72    BE446087Ta11P038A09P016F091F1_059.ab1    43 
   76  C BE446087Ta11P038A09P016F091R1_059.ab1   705 
   80    BE446087Ta11P038A09P016F091F1_059.ab1    51 
   88  C BE446087Ta11P038A09P016F091R1_059.ab1   693 
  100    BE446087Ta11P038A09P016F091F1_059.ab1    71 
  104  C BE446087Ta11P038A09P016F091R1_059.ab1   677 
  144    BE446087Ta11P038A09P016F091F1_059.ab1   115 
  152  C BE446087Ta11P038A09P016F091R1_059.ab1   629 
  220    BE446087Ta11P038A09P016F091F1_059.ab1   191 
  224  C BE446087Ta11P038A09P016F091R1_059.ab1   557 
  428    BE446087Ta11P038A09P016F091F1_059.ab1   399 
  432  C BE446087Ta11P038A09P016F091R1_059.ab1   349 
  772    BE446087Ta11P038A09P016F091F1_059.ab1   743 
Contig length: old 785, new 786

Contig length: old 786, new 786
New start: 0