No. words: 1337; after pruning: 1311


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    7    0.0 12.3 (1,1:603)  579  0.00 0.17 0.00  BE446087Ta11P052G03P016F091F1_044.ab1        9   604 (88)  C BE446087Ta11P052G03P016F091R1_044.ab1   (48)   597     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 7       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  296 nodes

 150 str. conn. components

Path
    1  C BE446087Ta11P052G03P016F091R1_044.ab1   645 
   78    BE446087Ta11P052G03P016F091F1_044.ab1    37 
   90  C BE446087Ta11P052G03P016F091R1_044.ab1   556 
   94    BE446087Ta11P052G03P016F091F1_044.ab1    53 
   98  C BE446087Ta11P052G03P016F091R1_044.ab1   548 
  102    BE446087Ta11P052G03P016F091F1_044.ab1    61 
  118  C BE446087Ta11P052G03P016F091R1_044.ab1   528 
  122    BE446087Ta11P052G03P016F091F1_044.ab1    81 
  126  C BE446087Ta11P052G03P016F091R1_044.ab1   520 
  138    BE446087Ta11P052G03P016F091F1_044.ab1    97 
  158  C BE446087Ta11P052G03P016F091R1_044.ab1   488 
  162    BE446087Ta11P052G03P016F091F1_044.ab1   121 
  166  C BE446087Ta11P052G03P016F091R1_044.ab1   480 
  174    BE446087Ta11P052G03P016F091F1_044.ab1   133 
  186  C BE446087Ta11P052G03P016F091R1_044.ab1   460 
  194    BE446087Ta11P052G03P016F091F1_044.ab1   153 
  198  C BE446087Ta11P052G03P016F091R1_044.ab1   448 
  202    BE446087Ta11P052G03P016F091F1_044.ab1   161 
  318  C BE446087Ta11P052G03P016F091R1_044.ab1   328 
  326    BE446087Ta11P052G03P016F091F1_044.ab1   285 
  354  C BE446087Ta11P052G03P016F091R1_044.ab1   292 
  358    BE446087Ta11P052G03P016F091F1_044.ab1   317 
  430  C BE446087Ta11P052G03P016F091R1_044.ab1   216 
  454    BE446087Ta11P052G03P016F091F1_044.ab1   413 
  458  C BE446087Ta11P052G03P016F091R1_044.ab1   188 
  474    BE446087Ta11P052G03P016F091F1_044.ab1   433 
  482  C BE446087Ta11P052G03P016F091R1_044.ab1   164 
  490    BE446087Ta11P052G03P016F091F1_044.ab1   449 
  502  C BE446087Ta11P052G03P016F091R1_044.ab1   144 
  510    BE446087Ta11P052G03P016F091F1_044.ab1   469 
  554  C BE446087Ta11P052G03P016F091R1_044.ab1    92 
  578    BE446087Ta11P052G03P016F091F1_044.ab1   537 
  586  C BE446087Ta11P052G03P016F091R1_044.ab1    60 
  590    BE446087Ta11P052G03P016F091F1_044.ab1   549 
  602  C BE446087Ta11P052G03P016F091R1_044.ab1    44 
  618    BE446087Ta11P052G03P016F091F1_044.ab1   577 
  626  C BE446087Ta11P052G03P016F091R1_044.ab1    20 
  634    BE446087Ta11P052G03P016F091F1_044.ab1   593 
Contig length: old 733, new 733

Contig length: old 733, new 733
New start: 0