No. words: 1369; after pruning: 1343


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.9 (1,1:824)  501  1.48 0.00 0.00  BE446087Ta11P052H03P016F091F1_044.ab1       64   604 (0)  C BE446087Ta11P052H03P016F091R1_044.ab1   (3)   762   222 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1    BE446087Ta11P052H03P016F091F1_044.ab1     1 
  215  C BE446087Ta11P052H03P016F091R1_044.ab1   611 
  219    BE446087Ta11P052H03P016F091F1_044.ab1   219 
  291  C BE446087Ta11P052H03P016F091R1_044.ab1   535 
  299    BE446087Ta11P052H03P016F091F1_044.ab1   299 
  407  C BE446087Ta11P052H03P016F091R1_044.ab1   419 
  411    BE446087Ta11P052H03P016F091F1_044.ab1   411 
  415  C BE446087Ta11P052H03P016F091R1_044.ab1   411 
  435    BE446087Ta11P052H03P016F091F1_044.ab1   435 
  439  C BE446087Ta11P052H03P016F091R1_044.ab1   387 
  443    BE446087Ta11P052H03P016F091F1_044.ab1   443 
  447  C BE446087Ta11P052H03P016F091R1_044.ab1   379 
Contig length: old 825, new 825

Contig length: old 825, new 825
New start: 0