No. words: 1570; after pruning: 1544


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.7 (1,1:837)  688  0.00 0.14 0.00  BE446087Ta12P052H03P016F091F1_042.ab1        1   713 (0)  C BE446087Ta12P052H03P016F091R1_042.ab1   (18)   839   126 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  356 nodes

 180 str. conn. components

Path
    1  C BE446087Ta12P052H03P016F091R1_042.ab1   857 
   29    BE446087Ta12P052H03P016F091F1_042.ab1    10 
   41  C BE446087Ta12P052H03P016F091R1_042.ab1   817 
   49    BE446087Ta12P052H03P016F091F1_042.ab1    30 
  357  C BE446087Ta12P052H03P016F091R1_042.ab1   501 
  361    BE446087Ta12P052H03P016F091F1_042.ab1   342 
  445  C BE446087Ta12P052H03P016F091R1_042.ab1   413 
  449    BE446087Ta12P052H03P016F091F1_042.ab1   430 
  473  C BE446087Ta12P052H03P016F091R1_042.ab1   385 
  477    BE446087Ta12P052H03P016F091F1_042.ab1   458 
  489  C BE446087Ta12P052H03P016F091R1_042.ab1   369 
  493    BE446087Ta12P052H03P016F091F1_042.ab1   474 
  501  C BE446087Ta12P052H03P016F091R1_042.ab1   357 
  525    BE446087Ta12P052H03P016F091F1_042.ab1   506 
  541  C BE446087Ta12P052H03P016F091R1_042.ab1   317 
  545    BE446087Ta12P052H03P016F091F1_042.ab1   526 
  553  C BE446087Ta12P052H03P016F091R1_042.ab1   305 
  561    BE446087Ta12P052H03P016F091F1_042.ab1   542 
  565  C BE446087Ta12P052H03P016F091R1_042.ab1   293 
  569    BE446087Ta12P052H03P016F091F1_042.ab1   550 
  585  C BE446087Ta12P052H03P016F091R1_042.ab1   273 
Contig length: old 857, new 857

Contig length: old 857, new 857
New start: 0