No. words: 1366; after pruning: 1340


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.5 (1,1:634)  608  0.32 0.32 0.00  BE446087Ta13P052G03P016F091F1_040.ab1        1   634 (46)  C BE446087Ta13P052G03P016F091R1_040.ab1   (50)   636     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C BE446087Ta13P052G03P016F091R1_040.ab1   686 
  107    BE446087Ta13P052G03P016F091F1_040.ab1    55 
  131  C BE446087Ta13P052G03P016F091R1_040.ab1   556 
  143    BE446087Ta13P052G03P016F091F1_040.ab1    91 
  183  C BE446087Ta13P052G03P016F091R1_040.ab1   504 
  195    BE446087Ta13P052G03P016F091F1_040.ab1   143 
  199  C BE446087Ta13P052G03P016F091R1_040.ab1   488 
  207    BE446087Ta13P052G03P016F091F1_040.ab1   155 
  319  C BE446087Ta13P052G03P016F091R1_040.ab1   368 
  327    BE446087Ta13P052G03P016F091F1_040.ab1   275 
  435  C BE446087Ta13P052G03P016F091R1_040.ab1   252 
  455    BE446087Ta13P052G03P016F091F1_040.ab1   403 
  471  C BE446087Ta13P052G03P016F091R1_040.ab1   216 
  483    BE446087Ta13P052G03P016F091F1_040.ab1   431 
  491  C BE446087Ta13P052G03P016F091R1_040.ab1   196 
  495    BE446087Ta13P052G03P016F091F1_040.ab1   443 
  507  C BE446087Ta13P052G03P016F091R1_040.ab1   180 
  511    BE446087Ta13P052G03P016F091F1_040.ab1   459 
  519  C BE446087Ta13P052G03P016F091R1_040.ab1   168 
  523    BE446087Ta13P052G03P016F091F1_040.ab1   471 
  555  C BE446087Ta13P052G03P016F091R1_040.ab1   132 
  571    BE446087Ta13P052G03P016F091F1_040.ab1   519 
  607  C BE446087Ta13P052G03P016F091R1_040.ab1    80 
  611    BE446087Ta13P052G03P016F091F1_040.ab1   559 
  627  C BE446087Ta13P052G03P016F091R1_040.ab1    60 
  635    BE446087Ta13P052G03P016F091F1_040.ab1   583 
  674  C BE446087Ta13P052G03P016F091R1_040.ab1    13 
  678    BE446087Ta13P052G03P016F091F1_040.ab1   626 
Contig length: old 731, new 732

Contig length: old 732, new 732
New start: 0