No. words: 1507; after pruning: 1481


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:826)  644  0.59 0.00 0.15  BE446087Ta13P052H03P016F091F1_040.ab1       16   695 (0)  C BE446087Ta13P052H03P016F091R1_040.ab1   (0)   812   134 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1    BE446087Ta13P052H03P016F091F1_040.ab1     1 
   19  C BE446087Ta13P052H03P016F091R1_040.ab1   809 
   23    BE446087Ta13P052H03P016F091F1_040.ab1    23 
  416  C BE446087Ta13P052H03P016F091R1_040.ab1   412 
  424    BE446087Ta13P052H03P016F091F1_040.ab1   424 
  444  C BE446087Ta13P052H03P016F091R1_040.ab1   384 
  480    BE446087Ta13P052H03P016F091F1_040.ab1   480 
  484  C BE446087Ta13P052H03P016F091R1_040.ab1   344 
  508    BE446087Ta13P052H03P016F091F1_040.ab1   508 
  512  C BE446087Ta13P052H03P016F091R1_040.ab1   316 
  524    BE446087Ta13P052H03P016F091F1_040.ab1   524 
  532  C BE446087Ta13P052H03P016F091R1_040.ab1   296 
  556    BE446087Ta13P052H03P016F091F1_040.ab1   556 
  560  C BE446087Ta13P052H03P016F091R1_040.ab1   268 
Contig length: old 827, new 827

Contig length: old 827, new 827
New start: 0