No. words: 1360; after pruning: 1334


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.1 (1,1:796)  491  0.39 0.00 0.00  BE446087Ta14P052H03P016F091F1_038.ab1        1   512 (0)  C BE446087Ta14P052H03P016F091R1_038.ab1   (51)   797   286 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  254 nodes

 129 str. conn. components

Path
    1  C BE446087Ta14P052H03P016F091R1_038.ab1   848 
   55    BE446087Ta14P052H03P016F091F1_038.ab1     4 
   71  C BE446087Ta14P052H03P016F091R1_038.ab1   778 
   80    BE446087Ta14P052H03P016F091F1_038.ab1    29 
  116  C BE446087Ta14P052H03P016F091R1_038.ab1   733 
  120    BE446087Ta14P052H03P016F091F1_038.ab1    69 
  156  C BE446087Ta14P052H03P016F091R1_038.ab1   693 
  160    BE446087Ta14P052H03P016F091F1_038.ab1   109 
  180  C BE446087Ta14P052H03P016F091R1_038.ab1   669 
  184    BE446087Ta14P052H03P016F091F1_038.ab1   133 
  224  C BE446087Ta14P052H03P016F091R1_038.ab1   625 
  228    BE446087Ta14P052H03P016F091F1_038.ab1   177 
  252  C BE446087Ta14P052H03P016F091R1_038.ab1   597 
  256    BE446087Ta14P052H03P016F091F1_038.ab1   205 
  284  C BE446087Ta14P052H03P016F091R1_038.ab1   565 
Contig length: old 848, new 848

Contig length: old 848, new 848
New start: 0