No. words: 1580; after pruning: 1554


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.7 (1,1:759)  732  0.00 0.13 0.13  BE446087Ta15P038A09P016F091F1_051.ab1        1   760 (38)  C BE446087Ta15P038A09P016F091R1_051.ab1   (22)   760     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  376 nodes

 190 str. conn. components

Path
    1  C BE446087Ta15P038A09P016F091R1_051.ab1   782 
   56    BE446087Ta15P038A09P016F091F1_051.ab1    33 
   60  C BE446087Ta15P038A09P016F091R1_051.ab1   723 
   72    BE446087Ta15P038A09P016F091F1_051.ab1    49 
   76  C BE446087Ta15P038A09P016F091R1_051.ab1   707 
   80    BE446087Ta15P038A09P016F091F1_051.ab1    57 
   88  C BE446087Ta15P038A09P016F091R1_051.ab1   695 
  100    BE446087Ta15P038A09P016F091F1_051.ab1    77 
  104  C BE446087Ta15P038A09P016F091R1_051.ab1   679 
  216    BE446087Ta15P038A09P016F091F1_051.ab1   193 
  220  C BE446087Ta15P038A09P016F091R1_051.ab1   563 
  224    BE446087Ta15P038A09P016F091F1_051.ab1   201 
  232  C BE446087Ta15P038A09P016F091R1_051.ab1   551 
  428    BE446087Ta15P038A09P016F091F1_051.ab1   405 
  432  C BE446087Ta15P038A09P016F091R1_051.ab1   351 
  672    BE446087Ta15P038A09P016F091F1_051.ab1   649 
  676  C BE446087Ta15P038A09P016F091R1_051.ab1   107 
  764    BE446087Ta15P038A09P016F091F1_051.ab1   741 
  775  C BE446087Ta15P038A09P016F091R1_051.ab1     9 
  779    BE446087Ta15P038A09P016F091F1_051.ab1   756 
Contig length: old 820, new 821

Contig length: old 821, new 821
New start: 0