No. words: 1544; after pruning: 1518


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.0 (1,1:754)  729  0.13 0.13 0.00  BE446087Ta16P038A09P016F091F1_049.ab1        1   755 (0)  C BE446087Ta16P038A09P016F091R1_049.ab1   (33)   756     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1  C BE446087Ta16P038A09P016F091R1_049.ab1   789 
   79    BE446087Ta16P038A09P016F091F1_049.ab1    45 
   83  C BE446087Ta16P038A09P016F091R1_049.ab1   707 
   91    BE446087Ta16P038A09P016F091F1_049.ab1    57 
   99  C BE446087Ta16P038A09P016F091R1_049.ab1   691 
  107    BE446087Ta16P038A09P016F091F1_049.ab1    73 
  115  C BE446087Ta16P038A09P016F091R1_049.ab1   675 
  135    BE446087Ta16P038A09P016F091F1_049.ab1   101 
  139  C BE446087Ta16P038A09P016F091R1_049.ab1   651 
  543    BE446087Ta16P038A09P016F091F1_049.ab1   509 
  547  C BE446087Ta16P038A09P016F091R1_049.ab1   243 
  778    BE446087Ta16P038A09P016F091F1_049.ab1   744 
  786  C BE446087Ta16P038A09P016F091R1_049.ab1     4 
Contig length: old 789, new 789

Contig length: old 789, new 789
New start: 0