No. words: 1389; after pruning: 1363


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    6    0.0 12.7 (1,1:656)  616  0.31 0.15 0.31  BE446087Ta16P052G03P016F091F1_034.ab1        7   653 (36)  C BE446087Ta16P052G03P016F091R1_034.ab1   (49)   651     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 6       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE446087Ta16P052G03P016F091R1_034.ab1   700 
   61    BE446087Ta16P052G03P016F091F1_034.ab1    18 
   65  C BE446087Ta16P052G03P016F091R1_034.ab1   636 
   99    BE446087Ta16P052G03P016F091F1_034.ab1    55 
  135  C BE446087Ta16P052G03P016F091R1_034.ab1   566 
  143    BE446087Ta16P052G03P016F091F1_034.ab1    99 
  151  C BE446087Ta16P052G03P016F091R1_034.ab1   550 
  155    BE446087Ta16P052G03P016F091F1_034.ab1   111 
  203  C BE446087Ta16P052G03P016F091R1_034.ab1   498 
  207    BE446087Ta16P052G03P016F091F1_034.ab1   163 
  391  C BE446087Ta16P052G03P016F091R1_034.ab1   310 
  395    BE446087Ta16P052G03P016F091F1_034.ab1   351 
  431  C BE446087Ta16P052G03P016F091R1_034.ab1   270 
  435    BE446087Ta16P052G03P016F091F1_034.ab1   391 
  443  C BE446087Ta16P052G03P016F091R1_034.ab1   258 
  455    BE446087Ta16P052G03P016F091F1_034.ab1   411 
  467  C BE446087Ta16P052G03P016F091R1_034.ab1   234 
  643    BE446087Ta16P052G03P016F091F1_034.ab1   599 
  647  C BE446087Ta16P052G03P016F091R1_034.ab1    54 
  683    BE446087Ta16P052G03P016F091F1_034.ab1   640 
Contig length: old 732, new 732

Contig length: old 732, new 732
New start: 0