No. words: 1613; after pruning: 1587


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 16.3 (1,1:827)  737  0.00 0.00 0.00  BE446087Ta17P052H03P016F091F1_063.ab1        2   759 (0)  C BE446087Ta17P052H03P016F091R1_063.ab1   (27)   827    70 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  380 nodes

 192 str. conn. components

Path
    1  C BE446087Ta17P052H03P016F091R1_063.ab1   854 
   31    BE446087Ta17P052H03P016F091F1_063.ab1     5 
   43  C BE446087Ta17P052H03P016F091R1_063.ab1   812 
   55    BE446087Ta17P052H03P016F091F1_063.ab1    29 
  239  C BE446087Ta17P052H03P016F091R1_063.ab1   616 
  243    BE446087Ta17P052H03P016F091F1_063.ab1   217 
  567  C BE446087Ta17P052H03P016F091R1_063.ab1   288 
  583    BE446087Ta17P052H03P016F091F1_063.ab1   557 
  587  C BE446087Ta17P052H03P016F091R1_063.ab1   268 
Contig length: old 854, new 854

Contig length: old 854, new 854
New start: 0