No. words: 1361; after pruning: 1335


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:631)  616  0.00 0.16 0.00  BE446087Ta18P052G03P016F091F1_061.ab1        1   632 (46)  C BE446087Ta18P052G03P016F091R1_061.ab1   (50)   633     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C BE446087Ta18P052G03P016F091R1_061.ab1   683 
   83    BE446087Ta18P052G03P016F091F1_061.ab1    32 
  159  C BE446087Ta18P052G03P016F091R1_061.ab1   525 
  163    BE446087Ta18P052G03P016F091F1_061.ab1   112 
  171  C BE446087Ta18P052G03P016F091R1_061.ab1   513 
  175    BE446087Ta18P052G03P016F091F1_061.ab1   124 
  183  C BE446087Ta18P052G03P016F091R1_061.ab1   501 
  199    BE446087Ta18P052G03P016F091F1_061.ab1   148 
  331  C BE446087Ta18P052G03P016F091R1_061.ab1   353 
  335    BE446087Ta18P052G03P016F091F1_061.ab1   284 
  367  C BE446087Ta18P052G03P016F091R1_061.ab1   317 
  375    BE446087Ta18P052G03P016F091F1_061.ab1   324 
  387  C BE446087Ta18P052G03P016F091R1_061.ab1   297 
  395    BE446087Ta18P052G03P016F091F1_061.ab1   344 
  403  C BE446087Ta18P052G03P016F091R1_061.ab1   281 
  415    BE446087Ta18P052G03P016F091F1_061.ab1   364 
  427  C BE446087Ta18P052G03P016F091R1_061.ab1   257 
  435    BE446087Ta18P052G03P016F091F1_061.ab1   384 
  439  C BE446087Ta18P052G03P016F091R1_061.ab1   245 
  443    BE446087Ta18P052G03P016F091F1_061.ab1   392 
  459  C BE446087Ta18P052G03P016F091R1_061.ab1   225 
  523    BE446087Ta18P052G03P016F091F1_061.ab1   472 
  527  C BE446087Ta18P052G03P016F091R1_061.ab1   157 
  643    BE446087Ta18P052G03P016F091F1_061.ab1   592 
  651  C BE446087Ta18P052G03P016F091R1_061.ab1    33 
  675    BE446087Ta18P052G03P016F091F1_061.ab1   624 
Contig length: old 729, new 729

Contig length: old 729, new 729
New start: 0