No. words: 1339; after pruning: 1313


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.0 (1,1:599)  578  0.17 0.17 0.00  BE446087Ta19P052G03P016F091F1_059.ab1        4   600 (96)  C BE446087Ta19P052G03P016F091R1_059.ab1   (45)   598     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE446087Ta19P052G03P016F091R1_059.ab1   643 
   51    BE446087Ta19P052G03P016F091F1_059.ab1     9 
   63  C BE446087Ta19P052G03P016F091R1_059.ab1   581 
   79    BE446087Ta19P052G03P016F091F1_059.ab1    36 
   87  C BE446087Ta19P052G03P016F091R1_059.ab1   557 
   99    BE446087Ta19P052G03P016F091F1_059.ab1    56 
  119  C BE446087Ta19P052G03P016F091R1_059.ab1   525 
  123    BE446087Ta19P052G03P016F091F1_059.ab1    80 
  131  C BE446087Ta19P052G03P016F091R1_059.ab1   513 
  139    BE446087Ta19P052G03P016F091F1_059.ab1    96 
  147  C BE446087Ta19P052G03P016F091R1_059.ab1   497 
  151    BE446087Ta19P052G03P016F091F1_059.ab1   108 
  159  C BE446087Ta19P052G03P016F091R1_059.ab1   485 
  163    BE446087Ta19P052G03P016F091F1_059.ab1   120 
  183  C BE446087Ta19P052G03P016F091R1_059.ab1   461 
  203    BE446087Ta19P052G03P016F091F1_059.ab1   160 
  323  C BE446087Ta19P052G03P016F091R1_059.ab1   321 
  327    BE446087Ta19P052G03P016F091F1_059.ab1   284 
  367  C BE446087Ta19P052G03P016F091R1_059.ab1   277 
  375    BE446087Ta19P052G03P016F091F1_059.ab1   332 
  443  C BE446087Ta19P052G03P016F091R1_059.ab1   201 
  479    BE446087Ta19P052G03P016F091F1_059.ab1   436 
  483  C BE446087Ta19P052G03P016F091R1_059.ab1   161 
  495    BE446087Ta19P052G03P016F091F1_059.ab1   452 
  499  C BE446087Ta19P052G03P016F091R1_059.ab1   145 
  503    BE446087Ta19P052G03P016F091F1_059.ab1   460 
  507  C BE446087Ta19P052G03P016F091R1_059.ab1   137 
  511    BE446087Ta19P052G03P016F091F1_059.ab1   468 
  515  C BE446087Ta19P052G03P016F091R1_059.ab1   129 
  519    BE446087Ta19P052G03P016F091F1_059.ab1   476 
  539  C BE446087Ta19P052G03P016F091R1_059.ab1   105 
  543    BE446087Ta19P052G03P016F091F1_059.ab1   500 
  547  C BE446087Ta19P052G03P016F091R1_059.ab1    97 
  579    BE446087Ta19P052G03P016F091F1_059.ab1   536 
  583  C BE446087Ta19P052G03P016F091R1_059.ab1    61 
  591    BE446087Ta19P052G03P016F091F1_059.ab1   548 
  599  C BE446087Ta19P052G03P016F091R1_059.ab1    45 
  615    BE446087Ta19P052G03P016F091F1_059.ab1   572 
  627  C BE446087Ta19P052G03P016F091R1_059.ab1    17 
  635    BE446087Ta19P052G03P016F091F1_059.ab1   592 
Contig length: old 739, new 739

Contig length: old 739, new 739
New start: 0