No. words: 1375; after pruning: 1349


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 12.7 (1,1:642)  609  0.00 0.47 0.00  BE446087Ta20P052G03P016F091F1_057.ab1        6   638 (48)  C BE446087Ta20P052G03P016F091R1_057.ab1   (49)   640     5 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  310 nodes

 157 str. conn. components

Path
    1  C BE446087Ta20P052G03P016F091R1_057.ab1   689 
   82    BE446087Ta20P052G03P016F091F1_057.ab1    35 
  114  C BE446087Ta20P052G03P016F091R1_057.ab1   576 
  122    BE446087Ta20P052G03P016F091F1_057.ab1    75 
  134  C BE446087Ta20P052G03P016F091R1_057.ab1   556 
  142    BE446087Ta20P052G03P016F091F1_057.ab1    95 
  150  C BE446087Ta20P052G03P016F091R1_057.ab1   540 
  154    BE446087Ta20P052G03P016F091F1_057.ab1   107 
  158  C BE446087Ta20P052G03P016F091R1_057.ab1   532 
  162    BE446087Ta20P052G03P016F091F1_057.ab1   115 
  182  C BE446087Ta20P052G03P016F091R1_057.ab1   508 
  186    BE446087Ta20P052G03P016F091F1_057.ab1   139 
  190  C BE446087Ta20P052G03P016F091R1_057.ab1   500 
  194    BE446087Ta20P052G03P016F091F1_057.ab1   147 
  202  C BE446087Ta20P052G03P016F091R1_057.ab1   488 
  214    BE446087Ta20P052G03P016F091F1_057.ab1   167 
  322  C BE446087Ta20P052G03P016F091R1_057.ab1   368 
  334    BE446087Ta20P052G03P016F091F1_057.ab1   287 
  354  C BE446087Ta20P052G03P016F091R1_057.ab1   336 
  358    BE446087Ta20P052G03P016F091F1_057.ab1   311 
  422  C BE446087Ta20P052G03P016F091R1_057.ab1   268 
  470    BE446087Ta20P052G03P016F091F1_057.ab1   423 
  478  C BE446087Ta20P052G03P016F091R1_057.ab1   212 
  526    BE446087Ta20P052G03P016F091F1_057.ab1   479 
  538  C BE446087Ta20P052G03P016F091R1_057.ab1   152 
  542    BE446087Ta20P052G03P016F091F1_057.ab1   495 
  554  C BE446087Ta20P052G03P016F091R1_057.ab1   136 
  574    BE446087Ta20P052G03P016F091F1_057.ab1   527 
  582  C BE446087Ta20P052G03P016F091R1_057.ab1   108 
  590    BE446087Ta20P052G03P016F091F1_057.ab1   543 
  602  C BE446087Ta20P052G03P016F091R1_057.ab1    88 
  614    BE446087Ta20P052G03P016F091F1_057.ab1   567 
  626  C BE446087Ta20P052G03P016F091R1_057.ab1    64 
  638    BE446087Ta20P052G03P016F091F1_057.ab1   591 
  650  C BE446087Ta20P052G03P016F091R1_057.ab1    40 
  666    BE446087Ta20P052G03P016F091F1_057.ab1   619 
Contig length: old 732, new 733

Contig length: old 733, new 733
New start: 0