No. words: 1555; after pruning: 1529


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:741)  695  0.27 0.67 0.00  BE446087Ta21P038A09P016F091F1_056.ab1        1   741 (41)  C BE446087Ta21P038A09P016F091R1_056.ab1   (27)   746     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  352 nodes

 178 str. conn. components

Path
    1  C BE446087Ta21P038A09P016F091R1_056.ab1   773 
   84    BE446087Ta21P038A09P016F091F1_056.ab1    52 
   88  C BE446087Ta21P038A09P016F091R1_056.ab1   686 
   96    BE446087Ta21P038A09P016F091F1_056.ab1    64 
  100  C BE446087Ta21P038A09P016F091R1_056.ab1   674 
  140    BE446087Ta21P038A09P016F091F1_056.ab1   108 
  144  C BE446087Ta21P038A09P016F091R1_056.ab1   630 
  176    BE446087Ta21P038A09P016F091F1_056.ab1   144 
  180  C BE446087Ta21P038A09P016F091R1_056.ab1   594 
  428    BE446087Ta21P038A09P016F091F1_056.ab1   396 
  432  C BE446087Ta21P038A09P016F091R1_056.ab1   342 
  668    BE446087Ta21P038A09P016F091F1_056.ab1   636 
  672  C BE446087Ta21P038A09P016F091R1_056.ab1   102 
  768    BE446087Ta21P038A09P016F091F1_056.ab1   736 
Contig length: old 813, new 814

Contig length: old 814, new 814
New start: 0