No. words: 1377; after pruning: 1351


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 13.0 (1,1:644)  627  0.00 0.16 0.00  BE446087Ta21P052G03P016F091F1_055.ab1        4   645 (45)  C BE446087Ta21P052G03P016F091R1_055.ab1   (44)   643     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  318 nodes

 161 str. conn. components

Path
    1  C BE446087Ta21P052G03P016F091R1_055.ab1   687 
   78    BE446087Ta21P052G03P016F091F1_055.ab1    36 
   86  C BE446087Ta21P052G03P016F091R1_055.ab1   602 
   94    BE446087Ta21P052G03P016F091F1_055.ab1    52 
  130  C BE446087Ta21P052G03P016F091R1_055.ab1   558 
  138    BE446087Ta21P052G03P016F091F1_055.ab1    96 
  142  C BE446087Ta21P052G03P016F091R1_055.ab1   546 
  146    BE446087Ta21P052G03P016F091F1_055.ab1   104 
  158  C BE446087Ta21P052G03P016F091R1_055.ab1   530 
  162    BE446087Ta21P052G03P016F091F1_055.ab1   120 
  174  C BE446087Ta21P052G03P016F091R1_055.ab1   514 
  182    BE446087Ta21P052G03P016F091F1_055.ab1   140 
  186  C BE446087Ta21P052G03P016F091R1_055.ab1   502 
  214    BE446087Ta21P052G03P016F091F1_055.ab1   172 
  322  C BE446087Ta21P052G03P016F091R1_055.ab1   366 
  326    BE446087Ta21P052G03P016F091F1_055.ab1   284 
  354  C BE446087Ta21P052G03P016F091R1_055.ab1   334 
  358    BE446087Ta21P052G03P016F091F1_055.ab1   316 
  406  C BE446087Ta21P052G03P016F091R1_055.ab1   282 
  414    BE446087Ta21P052G03P016F091F1_055.ab1   372 
  434  C BE446087Ta21P052G03P016F091R1_055.ab1   254 
  442    BE446087Ta21P052G03P016F091F1_055.ab1   400 
  454  C BE446087Ta21P052G03P016F091R1_055.ab1   234 
  478    BE446087Ta21P052G03P016F091F1_055.ab1   436 
  482  C BE446087Ta21P052G03P016F091R1_055.ab1   206 
  502    BE446087Ta21P052G03P016F091F1_055.ab1   460 
  506  C BE446087Ta21P052G03P016F091R1_055.ab1   182 
  518    BE446087Ta21P052G03P016F091F1_055.ab1   476 
  522  C BE446087Ta21P052G03P016F091R1_055.ab1   166 
  534    BE446087Ta21P052G03P016F091F1_055.ab1   492 
  538  C BE446087Ta21P052G03P016F091R1_055.ab1   150 
  574    BE446087Ta21P052G03P016F091F1_055.ab1   532 
  582  C BE446087Ta21P052G03P016F091R1_055.ab1   106 
  586    BE446087Ta21P052G03P016F091F1_055.ab1   544 
  590  C BE446087Ta21P052G03P016F091R1_055.ab1    98 
  594    BE446087Ta21P052G03P016F091F1_055.ab1   552 
  602  C BE446087Ta21P052G03P016F091R1_055.ab1    86 
  638    BE446087Ta21P052G03P016F091F1_055.ab1   596 
  658  C BE446087Ta21P052G03P016F091R1_055.ab1    30 
  666    BE446087Ta21P052G03P016F091F1_055.ab1   624 
Contig length: old 732, new 732

Contig length: old 732, new 732
New start: 0