No. words: 1572; after pruning: 1546


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.6 (1,1:751)  729  0.00 0.13 0.00  BE446087Ta23P038A09P016F091F1_052.ab1        1   752 (32)  C BE446087Ta23P038A09P016F091R1_052.ab1   (35)   753     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  374 nodes

 189 str. conn. components

Path
    1  C BE446087Ta23P038A09P016F091R1_052.ab1   788 
   80    BE446087Ta23P038A09P016F091F1_052.ab1    44 
  100  C BE446087Ta23P038A09P016F091R1_052.ab1   689 
  108    BE446087Ta23P038A09P016F091F1_052.ab1    72 
  112  C BE446087Ta23P038A09P016F091R1_052.ab1   677 
  228    BE446087Ta23P038A09P016F091F1_052.ab1   192 
  232  C BE446087Ta23P038A09P016F091R1_052.ab1   557 
  436    BE446087Ta23P038A09P016F091F1_052.ab1   400 
  440  C BE446087Ta23P038A09P016F091R1_052.ab1   349 
  680    BE446087Ta23P038A09P016F091F1_052.ab1   644 
  684  C BE446087Ta23P038A09P016F091R1_052.ab1   105 
  760    BE446087Ta23P038A09P016F091F1_052.ab1   724 
  764  C BE446087Ta23P038A09P016F091R1_052.ab1    25 
  780    BE446087Ta23P038A09P016F091F1_052.ab1   744 
Contig length: old 820, new 820

Contig length: old 820, new 820
New start: 0