No. words: 1578; after pruning: 1552


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 16.3 (1,1:754)  726  0.26 0.13 0.00  BE446087Ta24P038A09P016F091F1_050.ab1        1   755 (34)  C BE446087Ta24P038A09P016F091R1_050.ab1   (33)   756     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  368 nodes

 186 str. conn. components

Path
    1  C BE446087Ta24P038A09P016F091R1_050.ab1   789 
   81    BE446087Ta24P038A09P016F091F1_050.ab1    47 
   85  C BE446087Ta24P038A09P016F091R1_050.ab1   705 
   89    BE446087Ta24P038A09P016F091F1_050.ab1    55 
   97  C BE446087Ta24P038A09P016F091R1_050.ab1   693 
  105    BE446087Ta24P038A09P016F091F1_050.ab1    71 
  113  C BE446087Ta24P038A09P016F091R1_050.ab1   677 
  133    BE446087Ta24P038A09P016F091F1_050.ab1    99 
  137  C BE446087Ta24P038A09P016F091R1_050.ab1   653 
  213    BE446087Ta24P038A09P016F091F1_050.ab1   179 
  217  C BE446087Ta24P038A09P016F091R1_050.ab1   573 
  436    BE446087Ta24P038A09P016F091F1_050.ab1   402 
  440  C BE446087Ta24P038A09P016F091R1_050.ab1   350 
  779    BE446087Ta24P038A09P016F091F1_050.ab1   745 
Contig length: old 823, new 823

Contig length: old 823, new 823
New start: 0