No. words: 1290; after pruning: 1264


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   12    0.0 12.6 (1,1:633)  576  0.00 0.17 0.00  BE446087Ta24P052G03P016F091F1_049.ab1        1   593 (12)  C BE446087Ta24P052G03P016F091R1_049.ab1   (50)   635    42 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
12       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  294 nodes

 149 str. conn. components

Path
    1  C BE446087Ta24P052G03P016F091R1_049.ab1   685 
   58    BE446087Ta24P052G03P016F091F1_049.ab1     8 
   62  C BE446087Ta24P052G03P016F091R1_049.ab1   624 
   79    BE446087Ta24P052G03P016F091F1_049.ab1    28 
  135  C BE446087Ta24P052G03P016F091R1_049.ab1   551 
  143    BE446087Ta24P052G03P016F091F1_049.ab1    92 
  159  C BE446087Ta24P052G03P016F091R1_049.ab1   527 
  163    BE446087Ta24P052G03P016F091F1_049.ab1   112 
  191  C BE446087Ta24P052G03P016F091R1_049.ab1   495 
  195    BE446087Ta24P052G03P016F091F1_049.ab1   144 
  199  C BE446087Ta24P052G03P016F091R1_049.ab1   487 
  207    BE446087Ta24P052G03P016F091F1_049.ab1   156 
  211  C BE446087Ta24P052G03P016F091R1_049.ab1   475 
  215    BE446087Ta24P052G03P016F091F1_049.ab1   164 
  323  C BE446087Ta24P052G03P016F091R1_049.ab1   363 
  327    BE446087Ta24P052G03P016F091F1_049.ab1   276 
  355  C BE446087Ta24P052G03P016F091R1_049.ab1   331 
  359    BE446087Ta24P052G03P016F091F1_049.ab1   308 
  403  C BE446087Ta24P052G03P016F091R1_049.ab1   283 
  411    BE446087Ta24P052G03P016F091F1_049.ab1   360 
  443  C BE446087Ta24P052G03P016F091R1_049.ab1   243 
Contig length: old 685, new 685

Contig length: old 685, new 685
New start: 0