No. words: 1384; after pruning: 1358


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 10.4 (1,1:656)  603  1.07 0.46 0.15  BE446087Td01P052G03P016F091F1_047.ab1        1   652 (35)  C BE446087Td01P052G03P016F091R1_047.ab1   (38)   659     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  304 nodes

 154 str. conn. components

Path
    1  C BE446087Td01P052G03P016F091R1_047.ab1   697 
   60    BE446087Td01P052G03P016F091F1_047.ab1    20 
   64  C BE446087Td01P052G03P016F091R1_047.ab1   634 
   75    BE446087Td01P052G03P016F091F1_047.ab1    34 
  319  C BE446087Td01P052G03P016F091R1_047.ab1   379 
  323    BE446087Td01P052G03P016F091F1_047.ab1   282 
  331  C BE446087Td01P052G03P016F091R1_047.ab1   367 
  335    BE446087Td01P052G03P016F091F1_047.ab1   294 
  351  C BE446087Td01P052G03P016F091R1_047.ab1   347 
  355    BE446087Td01P052G03P016F091F1_047.ab1   314 
  371  C BE446087Td01P052G03P016F091R1_047.ab1   327 
  379    BE446087Td01P052G03P016F091F1_047.ab1   338 
  387  C BE446087Td01P052G03P016F091R1_047.ab1   311 
  407    BE446087Td01P052G03P016F091F1_047.ab1   366 
  427  C BE446087Td01P052G03P016F091R1_047.ab1   271 
  435    BE446087Td01P052G03P016F091F1_047.ab1   394 
  459  C BE446087Td01P052G03P016F091R1_047.ab1   239 
  543    BE446087Td01P052G03P016F091F1_047.ab1   502 
  551  C BE446087Td01P052G03P016F091R1_047.ab1   147 
  583    BE446087Td01P052G03P016F091F1_047.ab1   542 
  587  C BE446087Td01P052G03P016F091R1_047.ab1   111 
  639    BE446087Td01P052G03P016F091F1_047.ab1   598 
  643  C BE446087Td01P052G03P016F091R1_047.ab1    55 
  679    BE446087Td01P052G03P016F091F1_047.ab1   638 
Contig length: old 727, new 728

Contig length: old 728, new 728
New start: 0