No. words: 1572; after pruning: 1546


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.4 (1,1:824)  681  0.28 0.14 0.00  BE446087Td03P052H03P016F091F1_043.ab1        1   712 (0)  C BE446087Td03P052H03P016F091R1_043.ab1   (34)   826   114 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C BE446087Td03P052H03P016F091R1_043.ab1   860 
   38    BE446087Td03P052H03P016F091F1_043.ab1     4 
  132  C BE446087Td03P052H03P016F091R1_043.ab1   728 
  136    BE446087Td03P052H03P016F091F1_043.ab1   102 
  464  C BE446087Td03P052H03P016F091R1_043.ab1   396 
  472    BE446087Td03P052H03P016F091F1_043.ab1   438 
  488  C BE446087Td03P052H03P016F091R1_043.ab1   372 
  504    BE446087Td03P052H03P016F091F1_043.ab1   470 
  524  C BE446087Td03P052H03P016F091R1_043.ab1   336 
  532    BE446087Td03P052H03P016F091F1_043.ab1   498 
  540  C BE446087Td03P052H03P016F091R1_043.ab1   320 
  552    BE446087Td03P052H03P016F091F1_043.ab1   518 
  556  C BE446087Td03P052H03P016F091R1_043.ab1   304 
Contig length: old 860, new 859

Contig length: old 859, new 859
New start: 0 
S Change at: 52; seg lengths: entry 1, contig 1