No. words: 1626; after pruning: 1600


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 17.0 (1,1:813)  771  0.37 0.12 0.00  BE446087Td04P052H03P016F091F1_041.ab1        1   804 (0)  C BE446087Td04P052H03P016F091R1_041.ab1   (7)   815    11 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  392 nodes

 198 str. conn. components

Path
    1  C BE446087Td04P052H03P016F091R1_041.ab1   822 
   22    BE446087Td04P052H03P016F091F1_041.ab1    14 
  155  C BE446087Td04P052H03P016F091R1_041.ab1   668 
  159    BE446087Td04P052H03P016F091F1_041.ab1   151 
  535  C BE446087Td04P052H03P016F091R1_041.ab1   288 
  543    BE446087Td04P052H03P016F091F1_041.ab1   535 
  563  C BE446087Td04P052H03P016F091R1_041.ab1   260 
  780    BE446087Td04P052H03P016F091F1_041.ab1   772 
  788  C BE446087Td04P052H03P016F091R1_041.ab1    35 
Contig length: old 822, new 822

Contig length: old 822, new 822
New start: 0