No. words: 1371; after pruning: 1345


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:640)  620  0.00 0.31 0.00  BE446087Td05P052G03P016F091F1_039.ab1        1   640 (48)  C BE446087Td05P052G03P016F091R1_039.ab1   (41)   642     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C BE446087Td05P052G03P016F091R1_039.ab1   683 
   79    BE446087Td05P052G03P016F091F1_039.ab1    36 
   83  C BE446087Td05P052G03P016F091R1_039.ab1   601 
   87    BE446087Td05P052G03P016F091F1_039.ab1    44 
  111  C BE446087Td05P052G03P016F091R1_039.ab1   573 
  115    BE446087Td05P052G03P016F091F1_039.ab1    72 
  187  C BE446087Td05P052G03P016F091R1_039.ab1   497 
  199    BE446087Td05P052G03P016F091F1_039.ab1   156 
  323  C BE446087Td05P052G03P016F091R1_039.ab1   361 
  331    BE446087Td05P052G03P016F091F1_039.ab1   288 
  355  C BE446087Td05P052G03P016F091R1_039.ab1   329 
  359    BE446087Td05P052G03P016F091F1_039.ab1   316 
  407  C BE446087Td05P052G03P016F091R1_039.ab1   277 
  411    BE446087Td05P052G03P016F091F1_039.ab1   368 
  431  C BE446087Td05P052G03P016F091R1_039.ab1   253 
  455    BE446087Td05P052G03P016F091F1_039.ab1   412 
  483  C BE446087Td05P052G03P016F091R1_039.ab1   201 
  495    BE446087Td05P052G03P016F091F1_039.ab1   452 
  543  C BE446087Td05P052G03P016F091R1_039.ab1   141 
  555    BE446087Td05P052G03P016F091F1_039.ab1   512 
  567  C BE446087Td05P052G03P016F091R1_039.ab1   117 
  575    BE446087Td05P052G03P016F091F1_039.ab1   532 
  587  C BE446087Td05P052G03P016F091R1_039.ab1    97 
  591    BE446087Td05P052G03P016F091F1_039.ab1   548 
  607  C BE446087Td05P052G03P016F091R1_039.ab1    77 
  623    BE446087Td05P052G03P016F091F1_039.ab1   580 
  627  C BE446087Td05P052G03P016F091R1_039.ab1    57 
  635    BE446087Td05P052G03P016F091F1_039.ab1   592 
  639  C BE446087Td05P052G03P016F091R1_039.ab1    45 
  643    BE446087Td05P052G03P016F091F1_039.ab1   600 
  651  C BE446087Td05P052G03P016F091R1_039.ab1    33 
  655    BE446087Td05P052G03P016F091F1_039.ab1   612 
  663  C BE446087Td05P052G03P016F091R1_039.ab1    21 
  667    BE446087Td05P052G03P016F091F1_039.ab1   624 
Contig length: old 730, new 731

Contig length: old 731, new 731
New start: 0