No. words: 1508; after pruning: 1482


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.9 (1,1:824)  657  0.29 0.00 0.00  BE446087Td05P052H03P016F091F1_039.ab1        5   687 (0)  C BE446087Td05P052H03P016F091R1_039.ab1   (0)   821   139 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  336 nodes

 170 str. conn. components

Path
    1    BE446087Td05P052H03P016F091F1_039.ab1     1 
   16  C BE446087Td05P052H03P016F091R1_039.ab1   810 
   20    BE446087Td05P052H03P016F091F1_039.ab1    20 
   32  C BE446087Td05P052H03P016F091R1_039.ab1   794 
   36    BE446087Td05P052H03P016F091F1_039.ab1    36 
  516  C BE446087Td05P052H03P016F091R1_039.ab1   310 
  520    BE446087Td05P052H03P016F091F1_039.ab1   520 
  528  C BE446087Td05P052H03P016F091R1_039.ab1   298 
  544    BE446087Td05P052H03P016F091F1_039.ab1   544 
  552  C BE446087Td05P052H03P016F091R1_039.ab1   274 
Contig length: old 825, new 825

Contig length: old 825, new 825
New start: 0