No. words: 1385; after pruning: 1359


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.1 (1,1:645)  630  0.00 0.15 0.00  BE446087Td07P052G03P016F091F1_035.ab1        1   646 (49)  C BE446087Td07P052G03P016F091R1_035.ab1   (43)   647     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C BE446087Td07P052G03P016F091R1_035.ab1   690 
   73    BE446087Td07P052G03P016F091F1_035.ab1    29 
   77  C BE446087Td07P052G03P016F091R1_035.ab1   614 
   81    BE446087Td07P052G03P016F091F1_035.ab1    37 
   97  C BE446087Td07P052G03P016F091R1_035.ab1   594 
  101    BE446087Td07P052G03P016F091F1_035.ab1    57 
  153  C BE446087Td07P052G03P016F091R1_035.ab1   538 
  157    BE446087Td07P052G03P016F091F1_035.ab1   113 
  161  C BE446087Td07P052G03P016F091R1_035.ab1   530 
  165    BE446087Td07P052G03P016F091F1_035.ab1   121 
  181  C BE446087Td07P052G03P016F091R1_035.ab1   510 
  185    BE446087Td07P052G03P016F091F1_035.ab1   141 
  189  C BE446087Td07P052G03P016F091R1_035.ab1   502 
  197    BE446087Td07P052G03P016F091F1_035.ab1   153 
  433  C BE446087Td07P052G03P016F091R1_035.ab1   258 
  453    BE446087Td07P052G03P016F091F1_035.ab1   409 
  461  C BE446087Td07P052G03P016F091R1_035.ab1   230 
  645    BE446087Td07P052G03P016F091F1_035.ab1   601 
  649  C BE446087Td07P052G03P016F091R1_035.ab1    42 
  685    BE446087Td07P052G03P016F091F1_035.ab1   641 
Contig length: old 739, new 739

Contig length: old 739, new 739
New start: 0