No. words: 618; after pruning: 592


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    0   -0.8 -0.8 (1,1:253)  226  2.36 0.39 0.39  BE446403Ta20P078D02P108B031F1_062.ab1        1   254 (51)  C BE446403Ta20P078D02P108B031R1_062.ab1   (59)   254     1 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.8       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  102 nodes

 53 str. conn. components

Path
    1  C BE446403Ta20P078D02P108B031R1_062.ab1   313 
  302    BE446403Ta20P078D02P108B031F1_062.ab1   243 
Contig length: old 364, new 364

Contig length: old 364, new 365
New start: 0 
I Change at: 299; seg lengths: entry 1, contig 0