No. words: 590; after pruning: 564


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    1   -0.8 -0.8 (1,1:254)  219  3.94 0.39 0.00  BE446403Td06P078D02P108B031F1_044.ab1        1   254 (21)  C BE446403Td06P078D02P108B031R1_044.ab1   (59)   256     2 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.8       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  1       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  96 nodes

 50 str. conn. components

Path
    1  C BE446403Td06P078D02P108B031R1_044.ab1   315 
  304    BE446403Td06P078D02P108B031F1_044.ab1   244 
Contig length: old 335, new 335

Contig length: old 335, new 335
New start: 0